Selected Publications

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  • Enustun E, Deep A, Gu Y, Nguyen KT, Chaikeeratisak V, Armbruster E, Ghassemian M, Villa E, Pogliano J, Corbett KD. Identification of the bacteriophage nucleus protein interaction network. Nat Struct Mol Biol. 2023 Sep 4. doi: 10.1038/s41594-023-01094-5. Epub ahead of print. PMID: 37667030.
  • Prichard A, Lee J, Laughlin TG, Lee A, Thomas KP, Sy AE, Spencer T, Asavavimol A, Cafferata A, Cameron M, Chiu N, Davydov D, Desai I, Diaz G, Guereca M, Hearst K, Huang L, Jacobs E, Johnson A, Kahn S, Koch R, Martinez A, Norquist M, Pau T, Prasad G, Saam K, Sandhu M, Sarabia AJ, Schumaker S, Sonin A, Uyeno A, Zhao A, Corbett KD, Pogliano K, Meyer J, Grose JH, Villa E, Dutton R, Pogliano J. Identifying the core genome of the nucleus-forming bacteriophage family and characterization of Erwinia phage RAY. Cell Rep. 2023 May 30;42(5):112432. doi: 10.1016/j.celrep.2023.112432. Epub 2023 Apr 28. PMID: 37120812; PMCID: PMC10299810.
  • Birkholz EA, Laughlin TG, Armbruster E, Suslov S, Lee J, Wittmann J, Corbett KD, Villa E, Pogliano J. A cytoskeletal vortex drives phage nucleus rotation during jumbo phage replication in E. coli. Cell Rep. 2022 Aug 16;40(7):111179. doi: 10.1016/j.celrep.2022.111179. PMID: 35977483.
  • Laughlin TG, Deep A, Prichard AM, Seitz C, Gu Y, Enustun E, Suslov S, Khanna K, Birkholz EA, Armbruster E, McCammon JA, Amaro RE, Pogliano J, Corbett KD, Villa E. Architecture and self-assembly of the jumbo bacteriophage nuclear shell. Nature. 2022 Aug;608(7922):429-435. doi: 10.1038/s41586-022-05013-4. Epub 2022 Aug 3. PMID: 35922510; PMCID: PMC9365700.
  • Chaikeeratisak V, Khanna K, Nguyen KT, Egan ME, Enustun E, Armbruster E, Lee J, Pogliano K, Villa E, Pogliano J. Subcellular organization of viral particles during maturation of nucleus-forming jumbo phage. Sci Adv. 2022 May 6;8(18):eabj9670. doi: 10.1126/sciadv.abj9670. Epub 2022 May 4. PMID: 35507660; PMCID: PMC9067925.
  • Montaño ET, Nideffer JF, Sugie J, Enustun E, Shapiro AB, Tsunemoto H, Derman AI, Pogliano K, Pogliano J. Bacterial Cytological Profiling Identifies Rhodanine-Containing PAINS Analogs as Specific Inhibitors of Escherichia coli Thymidylate Kinase In Vivo. J Bacteriol. 2021 Sep 8;203(19):e0010521. doi: 10.1128/JB.00105-21. Epub 2021 Sep 8. PMID: 34280002; PMCID: PMC8425406.
  • Chaikeeratisak V, Birkholz EA, Pogliano J. The Phage Nucleus and PhuZ Spindle: Defining Features of the Subcellular Organization and Speciation of Nucleus-Forming Jumbo Phages. Front Microbiol. 2021 Jul 13;12:641317. doi: 10.3389/fmicb.2021.641317. PMID: 34326818; PMCID: PMC8314001.
  • Nguyen KT, Sugie J, Khanna K, Egan ME, Birkholz EA, Lee J, Beierschmitt C, Villa E, Pogliano J. Selective transport of fluorescent proteins into the phage nucleus. PLoS One. 2021 Jun 10;16(6):e0251429. doi: 10.1371/journal.pone.0251429. PMID: 34111132; PMCID: PMC8191949.
  • Chaikeeratisak V, Birkholz EA, Prichard AM, Egan ME, Mylvara A, Nonejuie P, Nguyen KT, Sugie J, Meyer JR, Pogliano J. Viral speciation through subcellular genetic isolation and virogenesis incompatibility. Nat Commun. 2021 Jan 12;12(1):342. doi: 10.1038/s41467-020-20575-5. PMID: 33436625; PMCID: PMC7804931.
  • Mendoza SD, Nieweglowska ES, Govindarajan S, Leon LM, Berry JD, Tiwari A, Chaikeeratisak V, Pogliano J, Agard DA, Bondy-Denomy J. A bacteriophage nucleus-like compartment shields DNA from CRISPR nucleases. Nature. 2020 Jan;577(7789):244-248. doi: 10.1038/s41586-019-1786-y. Epub 2019 Dec 9. PMID: 31819262; PMCID: PMC6949375.
  • Chaikeeratisak V, Khanna K, Nguyen KT, Sugie J, Egan ME, Erb ML, Vavilina A, Nonejuie P, Nieweglowska E, Pogliano K, Agard DA, Villa E, Pogliano J. Viral Capsid Trafficking along Treadmilling Tubulin Filaments in Bacteria. Cell. 2019 Jun 13;177(7):1771-1780.e12. doi: 10.1016/j.cell.2019.05.032. PMID: 31199917; PMCID: PMC7301877.
  • Chaikeeratisak V, Nguyen K, Khanna K, Brilot AF, Erb ML, Coker JK, Vavilina A, Newton GL, Buschauer R, Pogliano K, Villa E, Agard DA, Pogliano J. Assembly of a nucleus-like structure during viral replication in bacteria. Science. 2017 Jan 13;355(6321):194-197. doi: 10.1126/science.aal2130. PMID: 28082593; PMCID: PMC6028185.
  • Lamsa A, Lopez-Garrido J, Quach D, Riley EP, Pogliano J, Pogliano K. Rapid Inhibition Profiling in Bacillus subtilis to Identify the Mechanism of Action of New Antimicrobials. ACS Chem Biol. 2016 Aug 19;11(8):2222-31. doi: 10.1021/acschembio.5b01050. Epub 2016 Jun 14. PMID: 27193499; PMCID: PMC5459310.
  • Quach DT, Sakoulas G, Nizet V, Pogliano J, Pogliano K. Bacterial Cytological Profiling (BCP) as a Rapid and Accurate Antimicrobial Susceptibility Testing Method for Staphylococcus aureus. EBioMedicine. 2016 Jan 18;4:95-103. doi: 10.1016/j.ebiom.2016.01.020. PMID: 26981574; PMCID: PMC4776060.
  • Erb ML, Kraemer JA, Coker JK, Chaikeeratisak V, Nonejuie P, Agard DA, Pogliano J. A bacteriophage tubulin harnesses dynamic instability to center DNA in infected cells. Elife. 2014 Nov 27;3:e03197. doi: 10.7554/eLife.03197. PMID: 25429514; PMCID: PMC4244570.
  • Zehr EA, Kraemer JA, Erb ML, Coker JK, Montabana EA, Pogliano J, Agard DA. The structure and assembly mechanism of a novel three-stranded tubulin filament that centers phage DNA. Structure. 2014 Apr 8;22(4):539-48. doi: 10.1016/j.str.2014.02.006. Epub 2014 Mar 13. PMID: 24631461; PMCID: PMC3999902.
  • Nonejuie P, Burkart M, Pogliano K, Pogliano J. Bacterial cytological profiling rapidly identifies the cellular pathways targeted by antibacterial molecules. Proc Natl Acad Sci U S A. 2013 Oct 1;110(40):16169-74. doi: 10.1073/pnas.1311066110. Epub 2013 Sep 17. PMID: 24046367; PMCID: PMC3791758.
  • Kraemer JA, Erb ML, Waddling CA, Montabana EA, Zehr EA, Wang H, Nguyen K, Pham DS, Agard DA, Pogliano J. A phage tubulin assembles dynamic filaments by an atypical mechanism to center viral DNA within the host cell. Cell. 2012 Jun 22;149(7):1488-99.
  • Pogliano J, Pogliano N, Silverman J. Daptomycin mediated reorganization of membrane architecture causes mislocalization of essential cell division proteins J Bacteriol. September 2012 vol. 194 no. 17: 4494-4504. PMID: 22661688.
  • Eswaramoorthy P, Erb M, Gregory J, Silverman J, Pogliano K, Pogliano J, Ramamurthi K. Cellular architecture mediates DivIVA ultrastructure and regulates Min activity in Bacillus subtilis. (2011) mBIO 2011 Nov-Dec; 2(6): e00257-11.
  • Purdy Drew KR, Pogliano J. Dynamic instability-driven centering/segregating mechanism in bacteria. (2011) Proc Natl Acad Sci U S A. 2011 Jul 5;108(27):11075-80. Epub 2011 Jun 17. PMCID:21685333
  • Liu WT, Yang YL, Xu Y, Lamsa A, Haste NM, Yang JY, Ng J, Gonzalez D, Ellermeier CD, Straight PD, Pevzner PA, Pogliano J, Nizet V, Pogliano K, Dorrestein PC. (2010) Imaging mass spectrometry of intraspecies metabolic exchange revealed the cannibalistic factors of Bacillus subtilis. Proc Natl Acad Sci. Sep 14; 107(37):16286-90.
  • Derman AI, Truong B, Becker E, Fujioka A, Tucy TM, Erb M, Patterson P, Pogliano J. Phylogenetic analysis identifies many uncharacterized actin-like proteins (Alps) in bacteria: regulated polymerization, dynamic instability and treadmilling in Alp7A. (2009) Mol Microbiol. Aug;73(4):534-52.
  • Pogliano J. (2008) The Bacterial Cytoskeleton. Curr. Opin. Cell Biol. 20:19-27.
  • Derman AI, Lim-Fong G, Pogliano J. (2008) Intracellular mobility of plasmid DNA is limited by the ParA family of partitioning proteins. Mol. Microbiol. 67:935-946.
  • Larsen RA, Cusumano C, Fujioka A, Lim-Fong G, Patterson P, Pogliano J. (2007) Treadmilling of a prokaryotic tubulin-like protein, TubZ, required for plasmid stability in Bacillus thuringiensis. Genes & Dev. Jun 1;21(11):1340-52.